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AWS and Hopkins Engineering announce groundbreaking database for AI/ML antibody design

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Machine learning

AWS and Gray Lab at Johns Hopkins Whiting School of Engineering announce groundbreaking database for AI/ML antibody design

The Antibody Developability Benchmark is powered by one of the most diverse antibody datasets, enabling transparent performance evaluation for AI-guided antibody design.

By Staff writer

April 14, 2026

10 min read

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Overview by Amazon Nova

AWS and Johns Hopkins Engineering have launched the Antibody Developability Benchmark, a large-scale, diverse dataset for evaluating AI-guided antibody design. The dataset includes 50 seed antibodies with four structural formats targeting 42 antigens, measuring six key developability traits. It features engineered variants with both favorable and unfavorable developability outcomes, validated through wet-lab experiments. The benchmark supports zero-shot learning, allowing models to be evaluated without prior exposure to the dataset, enhancing confidence in results. The benchmark results are now available as part of Amazon Bio Discovery ; additional benchmarks will be added over time and released in a paper later this year.

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In 1986 the US Food and Drug Administration issued its first approval for human use of a therapeutic antibody. Despite steady advances in methodology, genetic sequencing, and biomedical science, 40 years later the process of discovering and optimizing therapeutic antibodies often remains prohibitively expensive, in terms of both cost and time. Recent experiences with pandemic-style infectious-disease outbreaks lend an even greater urgency to the need to more quickly and efficiently identify and develop these antibodies. Artificial-intelligence- and machine-learning-guided approaches to antibody design, in the form of biological foundation models (BioFM), represent a significant opportunity to address these challenges. Models built using protein language models (pLMs) and structure-based deep-learning frameworks have significant potential to predict antibody developability properties — the characteristics that determine whether a molecule is manufacturable, stable, and safe as a therapeutic. The development of those tools could drastically shorten discovery timelines while also reducing experimental costs. That potential, however, has been hindered by the lack of a public dataset that would allow researchers to benchmark those tools, a crucial step in the development of trustworthy in-silico tools for drug discovery. While there are existing public antibody datasets, they are too frequently limited by a focus on a single antibody format or target. Others are composed of naturally occurring or clinically advanced antibodies, a bias that severely limits their utility for training or evaluating predictive models. “Trust in the predictions made by these models must be grounded in evaluations against experimental data that is…

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Notable database for AI/ML antibody design

Amazon (Nova) has a writing signal matching data demand, evals and quality.