NVIDIA/digital-health-skills

NVIDIA/digital-health-skills

Description: NVIDIA Digital Health skills repo for agent-guided healthcare AI workflows, including evaluation, data generation, model adaptation, deployment guidance, and developer best practices.

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License: Apache-2.0

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Created: 2026-05-14T18:20:29Z

Pushed: 2026-05-28T21:17:06Z

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README:

NVIDIA Digital Health Examples

Agent skills and worked examples for healthcare AI workflows from NVIDIA Digital Health.

This repository hosts agent skills — markdown-based workflow guides consumable by AI coding assistants (Claude Code, Cursor, GitHub Copilot, and any client that supports the agentskills.io specification).

The first set covers a clinical ASR (automatic speech recognition) evaluation workflow: term curation, synthetic clinical-speech benchmark generation, KER (Keyword Error Rate) / entity-level scoring, and fine-tune guidance.

These skills are docs-only workflow guides. They do not ship companion runtime code; an agent following them will use the user's own environment and any required NVIDIA APIs (NIMs at build.nvidia.com, NeMo containers, etc.).

Skills in this repo

| Skill | Stage | What it guides | |-------|-------|----------------| | [digital-health-clinical-asr-setup](skills/digital-health-clinical-asr-setup/) | 1 | Verify NVIDIA_API_KEY, install Python deps, set up NGC + Docker for the NeMo training container, smoke-test the NVCF stack with Magpie TTS + Parakeet/Nemotron ASR. | | [digital-health-clinical-asr-build](skills/digital-health-clinical-asr-build/) | 2 | Specialty interview, term curation, two-tier IPA tagging, NeMo-format manifest synthesis. Inlines a Magpie TTS NVCF recipe. | | [digital-health-clinical-asr-eval](skills/digital-health-clinical-asr-eval/) | 3 | Transcribe a NeMo manifest via Parakeet/Nemotron ASR, score WER/CER/KER/SER, produce a five-section leaderboard, route via the post-eval decision tree. | | [digital-health-clinical-asr-finetune](skills/digital-health-clinical-asr-finetune/) | 4 | Stock NeMo SFT on Parakeet TDT v2, term-aware train/val split, offline cycle N+1 re-eval, optional Riva NIM deploy. |

Each skill folder contains SKILL.md (the workflow guide), optional references/*.md (deeper detail loaded on demand), and evals/evals.json (trigger / behavior / boundary test cases).

Getting started

Skills are loaded by your agent's skill loader. For Claude Code:

git clone git@github.com:NVIDIA/digital-health-skills.git
cd digital-health-skills

# Either symlink or copy the four skill folders into your Claude Code skills dir:
mkdir -p ~/.claude/skills
ln -s "$(pwd)/skills/digital-health-clinical-asr-setup" ~/.claude/skills/
ln -s "$(pwd)/skills/digital-health-clinical-asr-build" ~/.claude/skills/
ln -s "$(pwd)/skills/digital-health-clinical-asr-eval" ~/.claude/skills/
ln -s "$(pwd)/skills/digital-health-clinical-asr-finetune" ~/.claude/skills/

Then invoke them from your agent: /digital-health-clinical-asr-setup, /digital-health-clinical-asr-build, /digital-health-clinical-asr-eval, /digital-health-clinical-asr-finetune.

The skills walk the agent through each stage and hand off to the next. Start with /digital-health-clinical-asr-setup.

Requirements

To use the skills end-to-end you will need:

• An NVIDIA_API_KEY from build.nvidia.com — for hosted Magpie TTS + Parakeet/Nemotron ASR via NVCF (free tier is sufficient).
• An NGC_API_KEY from ngc.nvidia.com — only needed for Stage 4 (fine-tune), to pull the NeMo training container.
• Python 3.10+ for client-side scripting (the agent installs deps via your skill of choice).
• A CUDA host with the NeMo container (nvcr.io/nvidia/nemo:25.11.01) for Stage 4. Brev cloud GPUs supported.

Support

• Level: Experimental — the skills are new and evolving; expect rough edges.
• Issues: Use this repository's [Issues](../../issues) for bug reports and feature requests. Do not file security issues there (see SECURITY.md).

Contributing

This is a reference samples repo maintained by the NVIDIA Digital Health team — external pull requests are not accepted. See [CONTRIBUTING.md](CONTRIBUTING.md) for the full policy and what to do if you found a bug (open an [Issue](../../issues)) or want to adapt the skills for your own use (fork under the Apache 2.0 license).

Security

See [SECURITY.md](SECURITY.md) for the NVIDIA vulnerability disclosure process. Report security issues to psirt@nvidia.com, not via GitHub.

License

Apache License 2.0 — see [LICENSE](LICENSE).