google-deepmind/alphagenome_research v0.2.0

v0.2.0

Repository: google-deepmind/alphagenome_research

Tag: v0.2.0

Published: 2026-04-02T16:00:16Z

Prerelease: no

Release notes:

Added

• Non-zero mean computation to fine-tuning notebook.
• Gene LFC loss for GenomeTracksHead.
• Align alternate predictions for splice junctions when making indel

predictions.

Changed

• Fix splice-site and splice-site usage scoring to use the correct gene mask

extractor.

• Only consider splice sites that are within a gene body, and overlaps with

the provided variant.

• Pass requested outputs to the model prediction call, significantly reducing

roofline memory consumption by eliding redundant computation.

• Pad gene masks in gene scoring. This reduces the number of jit

recompilations for different numbers of genes.